Source code for gala.integrate.pyintegrators.rk5

"""5th order Runge-Kutta integration."""

import numpy as np

from ..core import Integrator
from ..timespec import parse_time_specification

__all__ = ["RK5Integrator"]

# These are the Dormand-Prince parameters for embedded Runge-Kutta methods
A = np.array([0.0, 0.2, 0.3, 0.6, 1.0, 0.875])
B = np.array(
    [
        [0.0, 0.0, 0.0, 0.0, 0.0],
        [1.0 / 5.0, 0.0, 0.0, 0.0, 0.0],
        [3.0 / 40.0, 9.0 / 40.0, 0.0, 0.0, 0.0],
        [3.0 / 10.0, -9.0 / 10.0, 6.0 / 5.0, 0.0, 0.0],
        [-11.0 / 54.0, 5.0 / 2.0, -70.0 / 27.0, 35.0 / 27.0, 0.0],
        [
            1631.0 / 55296.0,
            175.0 / 512.0,
            575.0 / 13824.0,
            44275.0 / 110592.0,
            253.0 / 4096.0,
        ],
    ]
)
C = np.array([37.0 / 378.0, 0.0, 250.0 / 621.0, 125.0 / 594.0, 0.0, 512.0 / 1771.0])
D = np.array(
    [
        2825.0 / 27648.0,
        0.0,
        18575.0 / 48384.0,
        13525.0 / 55296.0,
        277.0 / 14336.0,
        1.0 / 4.0,
    ]
)


[docs] class RK5Integrator(Integrator): r""" Fifth-order Runge-Kutta integrator with fixed timesteps. This integrator implements the classical fifth-order Runge-Kutta method (RK5) using the Dormand-Prince coefficients. It provides fifth-order accuracy for smooth problems with a fixed timestep, making it suitable for problems where high accuracy is needed and the solution varies smoothly in time. Unlike adaptive methods, this integrator uses a fixed timestep throughout the integration, which can be more predictable but may be less efficient for problems with varying time scales. Parameters ---------- func : callable A function that computes the phase-space coordinate derivatives. Must have signature ``func(t, w, *func_args)`` where ``t`` is time, ``w`` is the phase-space position array, and ``*func_args`` are additional arguments. func_args : tuple, optional Additional arguments to pass to the derivative function. func_units : :class:`~gala.units.UnitSystem`, optional Unit system assumed by the integrand function. progress : bool, optional Display a progress bar during integration. Default is False. save_all : bool, optional Save the orbit at all timesteps. If False, only save the final state. Default is True. Notes ----- The RK5 method uses six function evaluations per timestep to achieve fifth-order accuracy. The update formula is: .. math:: w_{n+1} = w_n + \\sum_{i=1}^{6} c_i k_i where the :math:`k_i` are intermediate slope estimates computed using the Dormand-Prince coefficients. Advantages: * Fifth-order accuracy for smooth problems * Stable and robust for most ODE systems * Predictable computational cost (6 function evaluations per step) Disadvantages: * Not symplectic (may not conserve energy for Hamiltonian systems) * Fixed timestep can be inefficient * More expensive per step than lower-order methods References ---------- * Dormand, J. R. & Prince, P. J. (1980). A family of embedded Runge-Kutta formulae. Journal of Computational and Applied Mathematics, 6(1), 19-26. * Hairer, E., Nørsett, S. P. & Wanner, G. (1993). Solving Ordinary Differential Equations I. Springer-Verlag. Examples -------- Integrate a simple harmonic oscillator: .. code-block:: python def derivs(t, w): return np.array([w[1], -w[0]]) # [dx/dt, dv/dt] integrator = RK5Integrator(derivs) orbit = integrator(w0=[1.0, 0.0], dt=0.01, n_steps=1000) """
[docs] def step(self, t, w, dt): """ Advance the integration by one timestep using the RK5 method. This method performs a single Runge-Kutta step using the classical fifth-order formula with Dormand-Prince coefficients. Parameters ---------- t : float Current time. w : :class:`~numpy.ndarray` Current state vector with shape ``(2*ndim, norbits)``. dt : float Integration timestep. Returns ------- w_new : :class:`~numpy.ndarray` Updated state vector at time ``t + dt``. Notes ----- The method computes six intermediate slopes :math:`k_1, ..., k_6` and combines them with the Dormand-Prince weights to achieve fifth-order accuracy. """ # Runge-Kutta Fehlberg formulas (see: Numerical Recipes) F = lambda t, w: self.F(t, w, *self._func_args) K = np.zeros((6, *w.shape)) K[0] = dt * F(t, w) K[1] = dt * F(t + A[1] * dt, w + B[1][0] * K[0]) K[2] = dt * F(t + A[2] * dt, w + B[2][0] * K[0] + B[2][1] * K[1]) K[3] = dt * F( t + A[3] * dt, w + B[3][0] * K[0] + B[3][1] * K[1] + B[3][2] * K[2] ) K[4] = dt * F( t + A[4] * dt, w + B[4][0] * K[0] + B[4][1] * K[1] + B[4][2] * K[2] + B[4][3] * K[3], ) K[5] = dt * F( t + A[5] * dt, w + B[5][0] * K[0] + B[5][1] * K[1] + B[5][2] * K[2] + B[5][3] * K[3] + B[5][4] * K[4], ) # shift dw = np.zeros_like(w) for i in range(6): dw += C[i] * K[i] return w + dw
[docs] def __call__(self, w0, mmap=None, **time_spec): # generate the array of times times = parse_time_specification(self._func_units, **time_spec) n_steps = len(times) - 1 dt = times[1] - times[0] w0_obj, w0, ws = self._prepare_ws(w0, mmap, n_steps=n_steps) if self.save_all: # Set first step to the initial conditions ws[:, 0] = w0 w = w0.copy() range_ = self._get_range_func() for ii in range_(1, n_steps + 1): w = self.step(times[ii], w, dt) if self.save_all: ws[:, ii] = w if not self.save_all: ws = w times = times[-1:] return self._handle_output(w0_obj, times, ws)